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Metagenomic Sequencing of Two Salton Sea Microbiomes
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Genome sequence of Streptomyces auratus DSM 41897
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … every family of fungi. In the following guest piece, JGI user Ying Chang in the Spatafora lab describes the effort … the zoospores were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both …
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Ancient Algae Reveal Secrets of Plant Evolution
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the Joint Genome Institute Community Science Program (CSP), the United States Department of Agriculture (USDA) … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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A Natural Mechanism Can Turbocharge Viral Evolution
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National … (NERSC), a U.S. Department of Energy Office of Science User Facility operated under Contract No. DE-AC02-05CH11231. … DE-AC02-05CH11231 through the Community Science Program (CSP), the G. Unger Vetlesen and Ambrose Monell Foundations, …
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Taking Stock of the Known and Unknown Microbial Space
… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of Wu, Seshadri, Nikos …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … as through the Facilities Integrating Collaborations for User Science Program (FICUS) with the Environmental … methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to studying …
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The Case for Conservation
… The genome assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to fully sequence the fire moss genomes ran the gamut of sequencing technologies, from making a bacterial artificial …
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Mindfully Moving JGI
… Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years … building at Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce …
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Fishing for Novel Cellulose Degraders
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial … define as “any form of functional enrichment leading to the sequencing of genomes from either individual cells or …
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Atif Shahab
… development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform … tracking, and enables efficient analysis and reporting of sequencing projects and their status. Mr. Shahab has … renowned institutions, developing solutions for large-scale sequencing projects and data analysis pipelines.  …
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Scaling Up Existing Skill Sets
… and insights on the project and everyone’s willingness to guide or mentor me during my internship.             Name: …
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