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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology … As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga … but that is still able to reproduce asexually through mitosis. The alga naturally produces high amounts of oil and … Research (BER) program to advance a fundamental understanding of genome biology, and develop genome-scale …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment … know anything about Principal Component Analysis (PCAs) when I first started, and overall found informatics to be … much to learn, I certainly feel much more advanced in my understandings than I would be at this stage without the …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers to … JGI was one of the first things we actually started doing when starting the lab. It has been, especially from an early … What is the review process for submitted proposals?   A:  When a proposal is submitted to the JGI, JGI scientists will …
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Better Genome Editing for Bioenergy
… Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To ensure the gene editing tool will make the right cut, researchers created a …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton … the crop’s annual economic impact of $500 billion worldwide underscores its value and importance in the fabric of our … important to crops. Additionally, cotton is almost entirely made up of cellulose and it is a fiber model to understand …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… convert elements present in urine to create hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was … advance their utility across the bioeconomy. Summary Wastewater treatment involves removing the organic matter before …
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Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans
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Robert Bowers
… and the environment. This includes studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he … on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck Institute in Hanover, Germany, where he developed novel tools …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment … a single species. By contrast, “allopolyploids” arise when different ancestral species crossbreed before genome … is likely the most important, but also the ability to understand the complicated evolutionary history of …
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A One-Stop Shop for Analyzing Algal Genomes
… organisms. PhycoCosm is one of the largest data repositories of its kind, with an interactive browser that allows … natural products, and have potential as biofuel feedstocks. Understanding the genetic underpinnings responsible for … that answers what genes are present in which organisms, when are they expressed, and what they do. Summary The name …
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