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Learning to Look
Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He … as a research scientist on projects to develop functional genomic technologies and to understand genome function in … board member for Scientific Reports … Education … Selected Publications … Awards and Service …
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon … storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be …
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) … Seattle, Washington.   Topics will include:  environmental microbiomes biodesign and synthetic biology AI/ML-enabled … to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user …
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