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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many … briefly about their time at the JGI at http://bit.ly/JGI15summerinternsvids . Click here to check out photos of the … Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; Sean …
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Virus-Microbe Interactions of Mud Island Mangroves
I wanted to incorporate that CSP, but also look at how viruses might be influencing the methane cycling within … wetlands.” A chapter of Rambo’s research focuses on how viruses influence carbon cycling in coastal mangroves. His …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he was among those selected by the DOE Office of Science … and large-scale data analysis to better characterize how viruses infect soil microbes and influence how soil …
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Three Join the JGI User Executive Committee
… early career researchers and new users, advise on data release and sharing policies, and help develop programs to …
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Computationally Classifying Fungal Lifestyles
… an algorithm that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest … over 100  Dothideomycetes genomes, just enough of a sample size to test if a computer algorithm could distinguish …
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FICUS
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Marine Microbe Contains Multitudes
Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long … on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, … Microbial Oceanography: Research and Education. … SAR324 on IMG/M Data portal … BBTools is a suite of fast, …
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Cultivating Symbiotic Antarctic Microbes
… dependent on the other for required nutrients—is genome size. The obligate symbiont’s genome is often reduced … to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, … capable of autonomous growth because they had larger genome sizes and their cells were not observed to associate with …
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2025 NeLLi Symposium
Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving … abstracts will be accepted due to space restraints. Poster Sizes: The poster boards are 4’x8′. Please be mindful in … the boards. JGI posters are typically printed in the ARCH E size which works well with the poster boards we have …
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10 From JGI on the 2019 Highly Cited Researchers List
… formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 … (GSC), and the International Committee on Taxonomy of Viruses to outline the minimum amount of information for an …
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Digging into Microbial Ecosystems Deep Underground
… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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