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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … and the science and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This … episode. These are episodes where Alison and I talk about a topic or kind of a subdiscipline in the natural products or …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be … (JGI), a DOE Office of Science User Facility, has been developing and applying new genomics capabilities that address …
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Scaling Up Existing Skill Sets
… for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has …
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JGI Launches Latest Strategic Plan
Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In 2019, the …
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Igor Grigoriev
DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint … Nature Ecol Evol . 6(7):965-978. Grigoriev et al (2021) PhycoCosm, a comparative algal genomics resource.  …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base … ones, a trend that threatens to destabilize the delicate marine food web and change the oceans as we know … are.” But according to a new study published September 16, 2021 in Nature Communications , warmer waters and …
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Cultivating Symbiotic Antarctic Microbes
… employed multiple microbiology and ‘omics techniques to experimentally determine that Nanohaloarchaeota are … that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … DAN: Hey there. This is Dan again, and you’re about to listen to the 3rd and final part of Natural Prodcast’s … we talked about the basic science and the history of the field of natural products or secondary metabolism, depending …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional … from seedling to maturity reveals biotic and metabolic responses. Proc. Natl. Acad. Sci. 116 (52) 27124-27132 …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the … Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in … in interactions with the scientific community at large. … 2021 LBNL Director’s Award for Exceptional Achievement in …
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Root cap cell corpse clearance limits microbial colonization in Arabidopsis thaliana
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Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and “Thermoanaerobacter cellulolyticus”
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