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JGI announces final round of 2022 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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JGI Advisory Committees Code of Conduct
… staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” … Roland Hatzenpichler , Montana State University   Joint Genome Institute Organizers: Frederik Schulz,  New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … . Zoospores were then collected by centrifugation. This process was repeated multiple times in order to obtain …
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … Plant Comparative Analysis group, and is responsible for genome annotation, comparative analysis and data … University, NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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JGI@25: Building a Better Bean
… of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … The team sequenced and assembled a 473-million basepair genome of the common bean, identifying genes related to … color begins to darken. Called “after-darkening,” this process not only means the beans take longer to cook, but it …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it … to be the result of multiple whole-genome duplications. The process of genome-doubling, where an extra set of …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is produced in environments without oxygen through a process called methanogenesis. Methanogenic microorganisms … capable of methanogenesis —  it’s the metabolic process these little makers rely on to survive. Now, new … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium from a … researchers sequenced and assembled the first complete genome of an uncultured symbiont. The single cell was …
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A Powerful Technique to Study Microbes, Now Easier
… on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. …
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