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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … vastly outnumber the microbes. Advances in sequencing technologies and computational tools have uncovered a … Finding the RNA virus snowflakes in the snowstorm of genomic data involved developing special computational …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of … tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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Three Join the JGI User Executive Committee
… The JGI User Executive Committee (UEC) recently welcomed three new … has served on review panels for the JGI’s Functional Genomics CSP and the JGI-EMSL FICUS programs and brings … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Genomics of Energy & …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… be single bacterial cells, visible to the naked eye. The unusual size is notable because bacteria aren’t usually … Université des Antilles, described the morphological and genomic features of this giant filamentous bacterium, along … explained. “This kind of discovery opens new questions about bacterial morphotypes that have never been studied …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… established and emerging scientists from academia, industry, and government organizations for three days of scientific presentation, … center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your …
Learn more
Kjiersten Fagnan
… Research Division. As a postdoc, her research focused on stable and accurate computational methods for … Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing … Data Collaborative where she leads infrastructure and user-centered design efforts. Dr. Fagnan was on the …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Simon Roux (Cross-field)  Jeremy Schmutz (Cross-field)  Susannah Tringe (Microbiology)  Tanja Woyke (Biology and Biochemistry)  Here’s a selection of studies these busy bees contributed to:  Giant bacteria visible to the … as other year-end science discovery lists.  Updates to the Genomic Encyclopedia of Bacteria and Archaea : Under the …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … Lab), is to become the leading integrative genome science user facility enabling researchers to solve the world’s …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics … Building was painted by Berkeley-based artist Nigel Sussman and dedicated at our 2022 Annual Meeting.  …
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Better Living Through Bioenergy
… Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the … Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …
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Training the Next Generation of Talent
… Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … in the DOE JGI/University of California, Merced Genomics Distinguished Graduate Internship Program. … and maintaining cells through the use of deep-sequencing technologies. The internship program was born out of a …
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