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A Community Resource for Secondary Metabolite Researchers
… to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford … the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for directed finishing and co-led the … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community …
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Annual Genomics of Energy & Environment Meeting
… you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse … The invited talks emphasize how the research infrastructure – DNA sequencing, synthesis, metabolomics, data …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about … State Fresno) and two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Green Algae Reveal One mRNA Encodes Many Proteins
… team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … Adjunct Professor at the University of California, Merced. Woyke received a 2014 Berkeley Lab Director’s Award … relationships and leading to the discovery of features such as a new genetic code. More recently reported in Nature …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … comes first. For nearly 40 years, the International Nucleotide Sequence Database Collaboration (INSDC) has … rights under JGI’s policy. In parallel, as of March 2nd, 2021, the JGI temporarily halted all automated submissions …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent … power of genomics and molecular characterization from the JGI and EMSL in one proposed research project. In the same … Scattering (BioSANS) instrument at the Center for Structural Molecular Biology (CSMB) at Oak Ridge National …
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Mapping Heat Resistance in Yeasts
… across very distant species that no longer mate to produce progeny. The ability to pinpoint which genes underlie … including biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence …
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Understanding Wildfire Recovery, Starting in Soil
… it was possible to identify specific attributes — such as heat resistance, fast growth rates, and an ability to … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User …
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Fungal Friends or Foes in Plant Roots
… relationships, but not all plants and fungi can form such symbiotic partnerships. To learn more about these other … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … toward filling gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled …
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Mike Sneddon
… and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific … clinical cancer diagnostics company, where he led the Production Informatics team in delivering validated …
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