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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China
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JGI at the AGU Fall Meeting
… December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … the map: continental-scale context for thousands of newly sampled microbial genomes from North American watersheds … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …
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Emiley Eloe-Fadrosh
… metagenomic datasets from host-associated and environmental samples to identify and characterize genomic information … National Microbiome Data Collaborative (NMDC). Prospective users with questions on how to partner with the Metagenome … Program; Genome Canada Large-Scale Applied Research Project Competition; NASA Exobiology; Graduate Women in …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions … from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common Fund grant …
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Ancient Algae Reveal Secrets of Plant Evolution
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Change’ (SPP 2237), and grant 410739858 in the frame of the project CharMod to K.v.S., as well as RE 1697/16-1 (CharMod) … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Silver age of GOLD introduces new features
… ago, the  Genomes OnLine Database has matured from six projects on a spreadsheet into a flagship  genomic metadata … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … curated metadata resources for organisms and environmental samples. The database aggregates relevant metadata from …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… as to better enable the mining of critical minerals and materials. The precise gene-targeting capability for … lipids, but  also designer chemicals and bio-based materials essential for national security, supply-chain … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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JGI announces 2025 Functional Genomics awardees
… Through our  CSP Functional Genomics call , we look for projects that will leverage the JGI's DNA synthesis and … in support of advancing the bioeconomy. This year's project goals range from engineering drought-tolerant woody … harnessing biomineralization processes for next-generation materials production. Enabled by the JGI, which is supported …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the … genomes (MAGs) reconstructed from sequenced environmental samples in a previous study. The team analyzed over 80,000 …
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Improving the Cacao Genome and Phytozome
… Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team … Wrigley. The annotated genome has been updated to a high quality modern standard and includes RNA-seq data. The … in updating the genome annotation was developing a high quality node for cacao used for systemic orthology to enable …
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