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UC Merced Interns Reflect on Their JGI Summer Projects
… worked closely with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. … Intern: Brendan Blasius (undergraduate) Mentor: Guohong "Albert" Wu Click the image to watch the video … Intern: Jacob …
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Tracing the Evolution of Shiitake Mushrooms
… fungi are part of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new analysis takes a  … white rot fungi, belonging to an elite group of decomposers that can break down all of wood’s components — cellulose, …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. … to date.  This summer internship program, which began in 2014, pairs undergraduate and graduate students … JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or educational …
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JGI & KBase at PAG XXVII
… and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI … information to BER-funded activities of plant systems that make use of these resources will present on their work. …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, … providing input and advice on JGI policies and practices that affect users and their access to technical capabilities …
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JGI Early Career Researchers Featured in mSystems Special Issue
… head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond the tried-and-true … high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … a set of "secondary metabolites," chemical compounds that often confer specialized capabilities that allow the … Over the years several secondary metabolites databases have been made available to the research community, each offering …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland … his interest in giving a voice to JGI users who feel that certain data sharing policies fail to represent the …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a … United States. They also provided multiple access points to the information. The team harnessed a community-science … first publicly available, river-focused microbial resource that provides information at multiple scales from genes to …
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When “The Blob” Made It Hotter Under the Water
… communities in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … marine microbes and by extension, the ocean’s capacity to act as a carbon sink. Summary As global temperatures …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… site. The chemical PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via … Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical … that require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have discovered … bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other forms of  Chloroflexota … in pesticides and refrigerants. Researchers found a number of surprising traits in  Dehalococcoidia inhabiting hot …
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