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Multi-Phenotype Association Decomposition: Unraveling Complex Gene-Phenotype Relationships
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Tackling soil diversity with the assembly of large, complex metagenomes
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Revealing the transcriptomic complexity of switchgrass by PacBio long-read sequencing
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Dissecting the complex regulation of pentose utilization in Aspergillus niger
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Game On: High School Students Drive Everglades Metagenomics Study
… In the summer of 2018, Jonathan Benskin was preparing to teach a second year A-Level Advanced International … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
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High-Throughput Single-Cell Transcriptome Profiling of Plant Cell Types
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… and developing RNA barcoding systems to optimize microbial bioreactors. This genomic research creates new … to unravel functional capabilities of plants, microbes and microbial communities, and understanding of natural environmental …
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A Sorghum Pangenome Opens More Doors to Discovery
… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … plant program. By producing more genomes of higher quality each year, the JGI provides more insight into plant … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence
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A User-Centered Approach to Accessing JGI Data
… ‘baseline metadata’ across the files that are submitted by each scientific program,” he said. “If each kingdom submits … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … and Higher Education at Ensenada (CICESE) in her first microbial ecology paper in the journal PLoS One . “Puerto … working environment I have consistently experienced each visit through my PhD. This environment makes it easy …
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