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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … key to better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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Getting back to the grass roots: harnessing specialized metabolites for improved crop stress resilience
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Construction of Viable Soil Defined Media Using Quantitative Metabolomics Analysis of Soil Metabolites
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Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and … at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the discovery of miniature … of thermostable Cas9 genes . The work also used resources at the National Energy Research Scientific Computing …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … New Mexico State University, the Environmental Molecular Sciences Laboratory and the U.S. Department of Energy (DOE) … Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User Facilities located at Pacific Northwest …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant … The study was funded by Natural Sciences and Engineering Research Council of Canada (NSERC) …
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI … to DA, FL, and FD from the Duke Institute of Genomic Sciences and Policy (for DNA sequencing and assembly); by a …
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DAS Tool for Genome Reconstruction from Metagenomes
… approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity … of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … with >90% completeness. These results, noted JGI User Programs Deputy Susannah Tringe , suggest that extracting …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… bioeconomy, including, potentially, methane as an energy source.  Until recently, our understanding of these methanogenic microorganisms was … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Massie S. Ballon
… aims to broaden awareness of and access to JGI public resources and the DOE mission, as well as help cultivate the … collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping … portfolio spans a wide range of topics beyond translating science, including crafting technical reports, developing …
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Multilab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass
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