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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me … one that incorporates big data. A large part of my project this summer was utilizing a high performance cluster …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several … genomes and those external genomes that enable JGI CSP projects – please first contact us at [email protected] …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In … production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE … of a foreign DNA sequence to generate a huge pool of mutants, each containing only a single copy of a given gene …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this identification, … Find more details on the instrumentation we use and our methodology for metabolite … Read more about our submission guidelines, what you can expect from your results as well as our …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a … team synthesized and cloned both chitosanase genes and mutants. DOIs of publicly available chitosanase sequences were … to JKJ and KSH. A portion of this work was performed on a project award ( …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … Berkeley National Laboratory (Berkeley Lab), led the project. He explained that large language models—artificial … can generate diverse types of enzyme genes, or numerous variants of one gene, enabling biologists and engineers to draft …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and … shared their thoughts on the students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial … Responses Under Climatic and Environmental Change (SPRUCE) project Melanie LeGro (2016 graduate intern): Currently …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or Personal Protective … working include safety glasses, lab coats, gloves, long pants that cover ankles, and shoes that fully enclose the …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of … also carries out custom preparative work for difficult user projects, including those that require fluorescence … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global … others to develop healthier and more productive cacao plants and ensure there will be cocoa for chocolate tomorrow … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. … to know you and provide all resources to excel in your project.”     Vicente Ramirez, UC Merced JGI Mentor: Albert …
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