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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and the S. magellanicum genome …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … and giant viruses. While the microbes in a single drop of water could outnumber a small city’s population, the number … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to … staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as representatives highlighted …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers …
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Gut Fungi: Unexpected Source of Novel Chemicals
… complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory. The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) … One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the …
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Viruses Reprogram Cells into Different Virocells
… be a duck. But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … project. For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy …
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I-Min (Amy) Chen
… research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the co-authors and key … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free …
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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Gene Expression: From On-Off Switch to Dial
… library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages an … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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