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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … of multiple omics data from various environments — that JGI users can leverage to create a more complete picture of … conditions. Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Extracting the Secrets of Secondary Metabolites
… target microbes, users of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … to insects. It is carried by an infectious nematode and releases toxins into the insect’s bloodstream that quickly … by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) … The JGI provides users access to cutting-edge cell sorting, DNA …
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The Expanded Diversity of Methylophilaceae from Lake Washington through Cultivation and Genomic Sequencing of Novel Ecotypes
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Meta-virus resource (MetaVR): expanding the frontiers of viral diversity with 24 million uncultivated virus genomes
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about …
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Sequencing Technologies & Products
… Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular capabilities and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … mostly related to biofuels and feedstocks. And then we expanded that to include six more species, so in total, we …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is … panel for the JGI’s Director, CIO, and Deputies. The IAC does not perform management functions, nor does it direct …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… U.S. Department of Energy national user facilities – the DOE Joint Genome Institute and the Molecular Foundry – both … produced by living organisms. The collaboration between the JGI and the Foundry on this project highlights an  ongoing … industrial processes.  To increase the interest in urine diversion processes, JGI and Foundry researchers sought other, …
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