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Mapping the Earth’s Hidden Fungal Kingdom
… Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … early, developing standardized workflows to produce high-quality, comparable genome assemblies across diverse … Research (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that …
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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Discovery of a novel filamentous prophage in the genome of the Mimosa pudica microsymbiont Cupriavidus taiwanensis STM 6018
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High Throughput Phosphoglycolate Phosphatase Activity Assay Using Crude Leaf Extract and Recombinant Enzyme to Determine Kinetic Parameters Km and Vmax Using a Microplate Reader
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The JGI announces 2024 awardees for our Community Science Program annual call
… “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, who heads JGI’s … and I look forward to seeing their outcomes.” The annual CSP call is focused on large-scale genomic science projects … here on our website . See below for the full list of 2024 CSP Annual Call awardees. …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate details of … to train GenomeOcean encompasses approximately 645.4 Gbp of high-quality contigs from diverse sources, derived from 219 Tb of … Research (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… rumen: Livestock live off plant matter, and their rumen are highly capable of breaking down potential biomass sources in … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that …
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Ben Bowen
… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating … & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. Metabolites, 5(3), 431–442. Yang, J., Rubel, O., Prabhat, Mahoney, M., & Bowen, B. …
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Graduate Students Get Thesis Research Opportunity at the JGI
… of the latest SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship … microbiomes. Tringe was also Kaze’s mentor during her 2018 internship, in which she explored anthropogenic impacts … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … a podcast produced by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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VEGA Symposium
… – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications … on the UC Berkeley campus. Organized every two years since 2018, the goal of this symposium is to bring together a …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially … I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … So, she’s studying yuccas, a group of plants in the Agave family with fleshy, sword-like leaves, often with …
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