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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … comes first. For nearly 40 years, the International Nucleotide Sequence Database Collaboration (INSDC) has … rights under JGI’s policy. In parallel, as of March 2nd, 2021, the JGI temporarily halted all automated submissions …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent … power of genomics and molecular characterization from the JGI and EMSL in one proposed research project. In the same … Scattering (BioSANS) instrument at the Center for Structural Molecular Biology (CSMB) at Oak Ridge National …
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Understanding Wildfire Recovery, Starting in Soil
… it was possible to identify specific attributes — such as heat resistance, fast growth rates, and an ability to … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User …
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Mike Sneddon
… and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific … clinical cancer diagnostics company, where he led the Production Informatics team in delivering validated …
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SIPs with Standards
… catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to make this technique, SIP, more standardized -- more reproducible, more reusable, and more insightful, for the future …
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Leo Baumgart
… pipelines to transition bench-scale methods into production workflows. He developed and scaled the multiDAP-seq … binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei sequencing methods to characterize gene regulation at …
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2023 Progress Report
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: … where renewable, biological resources drive processes, products, and services.  Advancing the bioeconomy will provide a …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… evolution and rapid changes in both genome content and structure following a genome duplication event that occured … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( Learn more about OGG in  this episode of to the JGI podcast Genome Insider . ) Summary A recent paper …
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Biodesign
… chromosomes for bioenergy, nutrient cycling and bioproduct applications.  The team has three subgroups: Synthetic … DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables users to validate hypotheses … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program.    Representative software …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Genome Sequencing Center. Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference …
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