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Rex Malmstrom
… a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … also carries out custom preparative work for difficult user projects, including those that require fluorescence … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science Graduate Student Research (SCGSR) program . Her …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Computing Center (NERSC) , another DOE Office of Science User Facility located at Berkeley Lab. Principal … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Webinar: MycoCosm Tutorial
… the organism’s ecology, mostly based on literature and user community inputs. We also have the potential to create … ) A: It is in our development plans 15.  Q: What is the user annotation process (are these functional annotations) … MycoCosm and Fungal Program pages ( https://jgi.doe.gov/our-science/science-programs/fungal-genomics/ ). You can also …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science and enable biotechnology … Mission  As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental …
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Leo Baumgart
… sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … Service (JAWS)." In 2025 IEEE International Conference on eScience (eScience), pp. 141-149. IEEE, 2025. Baumgart, Leo A., Ji Eun …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … as through the Facilities Integrating Collaborations for User Science Program (FICUS) with the Environmental … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National …
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2024 Progress Report
… Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead … Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … in April 2024 — through serving an increased number of users with a record output of products, making data easier …
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Draft Genome Sequences of the Black Truffles Tuber brumale Vittad. and Tuber indicum Cook & Massee
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Waiting to Respire
… and Saganbacteria were named for Carl Sagan, a renowned science popularizer and communicator (and at one time, the … with researchers from the Bigelow Laboratory for Ocean Sciences, Microbial Genome Program head Tanja Woyke of the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research scientist Frederik Schulz in …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… DOE Joint Genome Institute and the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how … to the Facilities Integrating Collaborations for User Science (FICUS) Call Karolina Michalska , Advanced Photon … or experimental design, contact  Tanja Woyke , Deputy for User Programs. EMSL : Contact EMSL User Program Services …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to … Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from the …
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