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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have … In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean Sciences described a novel technique to access …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to … also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest … on harnessing genomics to developing sustainable resources for biofuels and bioproducts. Andrew Nelson of the Boyce … University is studying microbial metabolism in the Antarctic Peninsula. Additionally, the proposal from Viola …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s Operations …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As … affect how microbes cycle nutrients and adapt to climate change. …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights … genome tree of viral diversity – yet.” “We expect this to change with not only new metagenome datasets becoming …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … specificity, particularly regarding the effects of climate change. Summary A team led by researchers at the U.S. …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but …
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Filling in the Plant Tree of Life
… we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to drive more productive food, medicine, and … swaths of the plant tree of life. One project aims to change that. …
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