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2025 NeLLi Symposium
… a a compelling position paper, and we are pleased to have Nature Microbiology editor Kyle Frischkorn joining us to … University Anne Dekas, Stanford University Kyle Frischkorn, Nature Microbiology Yunha Hwang, Harvard University Elahe … JGI Organizers …
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Ancient Algae Reveal Secrets of Plant Evolution
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research consortium led … evolution and could lead to advancements in improving plant resilience and productivity. The algal genomes sequences are …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo … the amount of time it takes to produce a dataset from months to days and halving the total reagent cost. While …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all … Deputy of Operations provides oversight and leadership of JGI operations infrastructure, including space and …
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI … worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Rocky Mountains. This represents the first study of this nature.  The phyllosphere is a major habitat for … contribute to key plant and ecosystem processes, including resilience to stress, decomposition, and interactions …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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Promoting the Power of Viral Metagenomics
… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since … throughout the planet’s oceans can exert great influence on earth’s carbon and nitrogen cycles. Currently one of the …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub willows through the  Community … of the sequences. The variety of palindromes observed in nature — for example, in humans Y chromosomes and some …
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