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An Addiction Crucial to a Fungus’ Reproduction
… bacteria to regulate key components of its reproductive machinery The Science To better understand how beneficial … genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported in the November 29, 2017 issue of … evolution; in this case, the endobacteria control the expression of ras2-1 , a gene crucial to reproductive …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In … production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE … at the JGI as part of a 2014 Community Science Program project. The results revealed that at each of eight genes, …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We … advanced genomic capabilities. This year we brought online the latest short-read technology, the Illumina NovaSeq X …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … i.e. in January. She talked about her  Community Science Project proposal with JGI, in which she’s studying a special …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… In this short video, UC Merced undergraduate and graduate … enough experience to make really good contributions to the project. Also my area of expertise over the past couple … I think that my skills were very complimentary to the project and I learned a lot and gonna take a lot away from …
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High quality draft genome sequence of Meganema perideroedes str. Gr1T and a proposal for its reclassification to the family Meganemaceae fam. nov.
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer … researcher who serves as their mentor. By contributing to projects that will help them build skills and tools, they … results not being the most promising. Going into the project, like, I kind of knew that my projects were …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … to JKJ and KSH. A portion of this work was performed on a project award ( … the FICUS program to JEM and used resources at the DOE Joint Genome Institute (JGI) and the Environmental Molecular …
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Triggering Morel Fruiting
… Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … Kuo, O’Donnell & Volk) to successfully fruit in common farmland soils. Compared to the contingent fruiting in the …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … would be rather intriguing given the lack of selective pressure on retaining the flagellum in the terrestrial …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is … surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … that will help solve energy and environmental challenges. In March 2008, the genome sequence of the forest fungus … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …
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