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… JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for science.  Dr. Sneddon is an accomplished … a laboratory information management (LIMS) system. He previously led the NGS Software team and metagenomic data platform … that went public and was later acquired by Ginkgo Bioworks. Earlier in his career, he was a core software …

… grass that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it can … amount of biomass which could then be converted into sustainable biofuels . For its importance to the DOE mission, … the JGI Flagship Plants . Since 2007, the JGI has been working on identifying switchgrass genes related to biomass …

… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there … these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of cloning and …

… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … and Kevin Solomon of the University of Delaware. Along with the existing UEC members, their areas of study span the … cell wall to address dairy sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, …

… Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications … utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, single-particle …

… plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … addition to the public/private status. Q: Does Data Portal work well with KBase and NMDC? A: We have reached out to …

… (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort … The UC Merced interns attended professional development workshops on science communication and technical writing while also making new connections with both researchers and other interns. At the end of the …

… Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the … for proposals in biological data science as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather proposals are submitted in …

… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly … Simon Roux (Cross-field)  Jeremy Schmutz (Cross-field)  Susannah Tringe (Microbiology)  Tanja Woyke (Biology and … published in  Nucleic Acids Research .  ID’ing RNA viruses with ease : Searching for RNA sequences within a database …

… novel research projects from PIs who have not led any previously accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with a widening circle of researchers whose work aligns with …

… a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing approaches including … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that …

… Sherbo, Jennifer E. Smith, Chin Chin Too, Brooke Weigel, Susanne Wilken, Jing Yuan, and Brittany N. Zepernick.    Each … , part of our  Community Science Program , allows us to work and share our tools with a widening circle of researchers whose work aligns with …