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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in Microbiology … Associate Professor at the University of California, Merced's School of Natural Sciences since 2015. Prospective …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Frederik Schulz
… the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic … to find novel functions that may impact microbiome structure and biogeochemical cycles. He provides his expertise … Nature Biotechnology 39, 499-509. Schulz et al. (2020) Giant virus diversity and host interactions through …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been … Adjunct Professor at the University of California, Merced. Woyke received a 2014 Berkeley Lab Director’s Award … relationships and leading to the discovery of features such as a new genetic code. More recently reported in Nature …
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Synthetic Biology Open Language (SBOL) Version 2.2.0
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and … and archaeal genomes. By clustering genomes based on their pairwise AF and ANI values, we were able to ascertain …
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Ian Blaby
Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … and post-doctoral positions at University of Florida and UCLA he has worked with a wide range of eukaryotic algae, … coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a custom high-throughput …
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Emiley Eloe-Fadrosh
… ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … as part of the Marine Microbiology Initiative. She conducted her postdoctoral training in human microbiome research … . doi: 10.1038/s41587-020-0718-6. Wood-Charlson EM, et al. 2020. The National Microbiome Data Collaborative: enabling …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … to understanding how the interactions between viruses and their host microbes impact the regulation of global nutrient … in developing and managing public viral genomics resources such as analytical tools and data repositories to two …
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Dan Rokhsar
… in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … annotation, and analysis of three human chromosomes. After successful completion of the human genome project, Professor … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … its nearby rural populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the … up the toxic chemicals is commonly known as Enhanced Reductive Dechlorination (ERD.) It is dependent on the presence …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome … Editorial board member for Scientific Reports … Education … Selected Publications … Awards and Service …
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