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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … Seshadri said. “It’s a reminder of the urgency to cultivate new microbial species.” Targeted Explorations for …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … stressors such as drought and temperatures. Summary Images of giant miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy or biofuels. Although a member …
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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … of cellular complexity, the tree of life, cultivation of new lineages and the function of candidate lineages in … Atomic Testing Museum at the Desert Research Institute. Metagenomic and single-cell sequence data have provided a means …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing … and data warehousing. This platform streamlines project management, laboratory information tracking, and enables … has extensive experience in Laboratory Information Management Systems (LIMS), bioinformatics, and genomics data …
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Len Pennacchio
… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …
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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) Joint Genome … from infecting viruses and phages. In the event of a new infection, the microbes use the genetic information …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… their JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to school.  … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … and micro level, which was really cool for me. It encouraged me to keep looking at the possibility of working at a …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … available to the research community, each offering specific features or tools. The U.S. Department of Energy (DOE) Joint …
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … neither the United States Government nor the University of California nor any of their employees, makes any …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … range of temperatures, levels of acidity and geographical features, and the archaeal lineages found there and …
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Integrating Experimentation with Data
… The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to … Click to view a downloadable copy of the sponsor prospectus … Keynote Speakers Jim Collins Massachusetts Institute of Technology Kristala Prather Massachusetts Institute of …
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Decoding Yellowstone’s Microbial Mats
… began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study … mats. Along the way, they’ve encountered surprises, adopted new technologies, and made a few discoveries about the …
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