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Atif Shahab
… tracking JGI's sequencing projects and data warehousing. This platform streamlines project management, laboratory … information tracking, and enables efficient analysis and reporting of sequencing projects and their status. Mr. Shahab has extensive experience in Laboratory Information Management …
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JGI Workshops at PAG
… of algae, and sampling of the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this Workshop is to illustrate the … BER Plant Genomic Science In this workshop, we will present current and ongoing developments at the JGI and …
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Community Science Program
… at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance genome science-based … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of … and Environment (INRAE). Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples … Sweden; Montmorency, Canada. These sites respectively represent Mediterranean, temperate, and boreal forests.  Many …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the … implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck … genomes, which led to the discovery of thousands of genetic switches implicated in developmental and disease …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi
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Meeting Code of Conduct
… following Code of Conduct. Event organizers will enforce this Code throughout the entire event. All participants are expected to be familiar with this policy. Our aim in hosting an event is to build a stronger community. Our goal is to create an …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses are likely to infect, and (iii) identifying the genetic traits of the viruses to better understand their … The JGI team, including Kyrpides, Camargo, and Roux, has an extensive track record of developing cutting-edge tools for … environmental samples to help uncover the phylogenetic diversity of the human gut microbiome. By bringing their …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility … most relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing … begin work, checking such factors as genome size, polymorphism level, sample quality and availability, etc.   During …
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Fungal Friends or Foes in Plant Roots
… compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated … They play key roles in maintaining the plant’s health and diversity, which can in turn boost yields for both food and … 84 gene families that were common in fungi that live within plants (endophytes). These include genes that degrade …
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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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