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… and seven graduate students from UC Merced through their long standing internship program. In just two months, the … and also made new friends while working on their summer projects. Watch the short video here to see what they had to … “ Exploring the epigenetic basis of pathogenicity in bacteria” Erika Maquiling : “Being a JGI intern means going …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for … Genomes (IMG) data management system … As part of this project, pairwise average nucleotide identities (ANI) and … fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based …

… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the … classroom modules Testimonials: … A primary purpose of this project is to bring educators from a broad range of … sequence to biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: …

… proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … interested in better characterizing the role endosymbiotic bacteria play on mating habits of Mucoromycota fungi, and …

… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions … prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol , 2023). These tools have significantly …

Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … duplications, and even more ancient gene transfers from bacteria have all armed the plant with an array of defense … to Z.-H.C.). B.A.A. and D.W.S. acknowledge funding for this project from the Ambrose Monell Foundation. … Ceratopteris …

… deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in … DNA sequences that code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating … (Nachwuchs-gruppe “Dr. Alexander Probst”), and the NOVAC project of the German Science Foundation (grant number DFG …

The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

Team develops a computational pipeline to sift and characterize RNA virus sequences.  … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses … the world. One expanded group is of viruses associated with bacteria; until now, most of the known RNA viruses have been …

… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides mccartyi and  Dehalobacter … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …

A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in … Duke University, published their research related to how bacteria that colonize the roots of sphagnum work to … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …