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Annotation survey and life-cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit
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Frequently Asked Questions: Proposal Submission
… ; click on the call link to see specific details including project types supported, sample/capacity limits, and … should indicate this in the proposal so we can select the project provisionally. If your project makes it successfully through the scientific review …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome … they regulate their genomes, but is not well understood in fungi. A team of researchers reported on the largest … tree of life to date, involving more than 500 species of fungi. The Impact Interactions between plants and fungi run …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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10 From JGI on the 2019 Highly Cited Researchers List
… of 21 fields appear on the 2019 list. Congratulations to: Project Manager Kerrie Barry, Cross-Field Category Fungal … , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in that … an Aspergillus fungal subgroup, section Nigri. Aspergillus fungi play important roles in areas ranging from industrial …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Soil virus offers insight into maintaining microorganisms
… — replicating itself.  Chitin is found in the cell walls of fungi and the exoskeleton of insects. It is one of the most … were distinct from similar proteins found in archaea, fungi or bacteria. Certain similarities with bacterial … to JKJ and KSH. A portion of this work was performed on a project award ( …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The … process. Now, a new study shows how anaerobic fungi — the kind living in the stomachs of livestock — are … components into  biofuels and bioproducts. If anaerobic fungi could be used to effectively modify lignin without …
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Trent Northen
… through the Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI … Swift CL, et al. Anaerobic gut fungi are an untapped reservoir of natural products. …
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The fungus that made itself at home
… so destructive in houses. A study involving six brown rot fungi reveals the genomic changes Serpula lacrymans has … User Facility, compared the genomes of two strains of fungi Serpula lacrymans – var. lacrymans from Europe and … or confrontation experiments, involving these three Serpula fungi against three other brown rot fungi to see how the …
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A User-Centered Approach to Accessing JGI Data
… data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made a concerted effort to … limited to: Public data: datasets associated with completed projects that are eligible for public release, have … For IMG & Mycocosm: Data that is associated with an ITS project ID (AP or SP) Q: What JGI Data Policy considerations …
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Leo Baumgart
… which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei …
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