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Deciphering the evolution of flavin-dependent monooxygenase stereoselectivity using ancestral sequence reconstruction
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction
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Generation of Long Insert Pairs Using a Cre-LoxP Inverse PCR Approach
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The Case for Conservation
… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … pathways could lead to the discovery of genes that could be used for multiple biotechnological applications. These … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Supercharging SIP in the Fungal Hyphosphere
The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with … and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … Officer). “You define the word ‘collegial’” “Every user facility at this Laboratory needs to have a great … before the event segued to remarks by the leadership of the DOE Office of Biological and Environmental Research: …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her … Lead position in 2009 and assumed the Deputy Director of User Program position in 2021. In addition to her JGI …
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The JGI announces 2024 awardees for our Community Science Program annual call
Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, who heads JGI’s User Programs. “These PIs have proposed research that … various important scientific questions relevant to the DOE’s mission, and I look forward to seeing their outcomes.” …
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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … Universidad de Zaragoza and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Calculating the Costs of Multiple Switchgrass Gene Copies
A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate bioenergy …
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