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Team Science Reveals Important Protein in Poplar
… bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … within poplar involved in plant growth, lignin production, and disease resistance.  The Impact With increased … Poplars grow quickly and the plants can be crossed to produce traits that make them more appealing bioenergy …
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The endosymbiotic box of protective tricks
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) … Energy operated under contract no. DE-AC02-05CH11231. This project received funding from the European Research Council …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new … — but the experts we were able to work with on this project to ask questions about structure and function,” … expressing and purifying the range of proteins these genes produced, to identify examples that would work well for  in …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. … for energy, growth and reproduction—most organisms produce a set of "secondary metabolites," chemical compounds … metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence … went to the Berkeley Lab team comprised of JGI and ExaBiome Project team, supported by the DOE Exascale Computing … collaboration between JGI and the ExaBiome team. “They produced fantastic scientific results this year by …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … to how humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production
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Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom
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Sequencing of Multiple Clostridial Genomes Related to Biomass Conversion and Biofuel Production ▿
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A Sorghum Pangenome Opens More Doors to Discovery
… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … holds keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In addition to … of Energy, the Gates Foundation, the Advanced Research Projects Agency-Energy (ARPA-E) and the United States Agency …
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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …
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