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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … the Letter of Intent; rather proposals are submitted in a single step. …
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Natural Prodcast Episode 20: Brian Bachmann
… come, though, too when you start talking about going after single gene clusters. BRIAN BACHMANN: That’s right. JACKIE … mammalian systems. But it allows us to assay on a single cell level against cell lines and against primary cells … by chemical synthesis and make analogs in combination of mutagenesis and direct evolution. Yeah. DAN UDWARY: So it’s …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, … of the tree of life. Used in tandem over the years, metagenomics and single cell genomics have afforded JGI users …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … for example, in terms of the stereochemistry, such that single changes can lead to a particular high activity … the fungal farms from other fungus that want to take advantage of that resource. So in those type of situations, what …
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DNA Synthesis Program
… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … Program plays a central role in advancing functional genomics, focusing on developing genetic systems that can …
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CSP Large Scale Call
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Natural Prodcast Episode 2: The Primer, Part 2
… maybe obvious or notable. We are still in – not an early stage. I think we can identify most secondary metabolism … that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds …
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Natural Prodcast Episode 1: The Primer, Part 1
… that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … great conversations that we’ve already recorded with some excellent scientists, and that’s probably how we’ll continue … tree and became incorporated. And because it had some advantage to the tree – it almost certainly, you know, prevents …
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Fungal & Algal Program
… into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … seeks to expand our understanding of algal biology using genomics and multi-omics by working with research labs and … research and applied science. By advancing fungal and algal genomics, the program helps lay the groundwork for a …
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