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… and other tools. By bringing users together through our systems, we build far-reaching communities of researchers to … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that … from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are …

… sample and project metadata, and to access JGI tools and systems. … Mycocosm (citation: https://doi.org/10.1093/nar/gkt1183 ) Algae: Phycocosm (citation: https://doi.org/10.1093/nar/gkaa898 ) Plants: Phytozome (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    …

… Investigator Providing a general orientation to JGI systems to Investigators Preparation of formal Statement of … and receive instructions for how to access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… A complete publication list available at Google Scholar. Dutkiewicz, Z. … “ Adaptation strategies of giant viruses to low-temperature marine ecosystems .”  The ISME Journal , Volume 18 Issue 1. Pitot, … Publications …

… sponsored by Berkeley Lab and one or more partners for shared benefit. Industry partners may elect titles to their … Facultative Methylotroph technology — interact with rice plants. Using the JGI’s fabricated ecosystem technology ( … Lab Typically larger budget projects; lab and partner may share costs; in-kind required …

… NIGEL MOUNCEY: No, I’m not. I grew up in the South of England, in rural England. I kind of always wanted to be a … core science programs which are microbes, and fungi, and algae plants, synthetic biology. And so we have, I think, … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… provides customized analysis, the JGI also participates in publication of results. … the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and thematic scope of …

… product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I was working on chemically … [coming up in a future episode!] and we were talking about signaling molecules. And is there a difference between a … can turn on the natural product, say clusters or expression systems so that-- BETSY PARKINSON: Exactly. DAN: --you get …

… just not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … my career. So when I was at URI, University of Rhode Island, and I was a assistant professor– I was working on a …

… of secondary metabolism research, and I hope to be able to share a few more stories from there as we go forward. And … As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how … not familiar, it’s basically a throwback to “Alice In Wonderland” where the Red Queen just runs faster and faster to …

… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … come from all kinds of disparate environments. There’s some marine. There’s some soil samples. There’s human gut …

… to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … predictive watershed scale models to manage river ecosystems. One application for the information is the … river health diagnostic systems to monitor for and identify land use or water quality changes. Summary Rivers are key …