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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … Genomes (IMG) data management system … As part of this project, pairwise average nucleotide identities (ANI) and …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform … information into biological function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and … and Gene Integration … Metabolomics Program in Detail … Projects and Initiatives … Metabolomics Program Head … …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to … an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range of …
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … Prodcast … Secondary Metabolites Program in Detail … Projects and Initiatives … Secondary Metabolites Program …
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Products
… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … choice Glycerol stock of sequence verified clone depends on project DNA Synthesis Combinatorial libraries Multiple genes … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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JGI Portals
… resource for the broader scientific community and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … the completion of DOE’s commitment to the Human Genome Project , the University of California, which manages …
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Natural Prodcast Episode 12: Nadine Ziemert
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear … to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ motivations, the …
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