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FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … projects as described above, but JGI portals will still host use-restricted data until the period of use-restriction …

… understanding those broader environmental and ecological roles for secondary metabolites is what our mission is. … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog …

… could be used to treat these highly resistant bacterial and fungal pathogens. And we’ve actually just wrapped up a year, … DNA synthesis, metabolomics. Where do you see the role of a big place like JGI in terms of helping out your … naturalprodcast.com . Special thanks, as always, to my co-host Alison Takemura. If you like Alison, you want to hear …

… to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome … sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using … assembly from virus pools/plaques obtained from a single host, many unordered contigs. Assembly, annotation ( IMG ) …

… potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting … our understanding of plants’ biological and ecological roles to foster sustainable solutions for energy, …

… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … National Laboratory in Oak Ridge, Tennessee: CBI pursues a host of new technologies to alleviate critical cost barriers …

… other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … fungi and bacteria can thrive in plant roots. They play key roles in maintaining the plant’s health and diversity, which … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed …

Studying how these compounds are biosynthesized and their roles in the environment, can unlock new avenues for … under standard laboratory conditions by their native hosts. We are developing cell-free based systems to express … Card toolkit (HERC-tk) to enable users to identify the best host to express their BGC(s). This is based on extensive …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …

The Community Science Program (CSP) provides the scientific community at large with access … of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that …

… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie … Berkeley is interested in better characterizing the role endosymbiotic bacteria play on mating habits of …