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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
M. polymorpha is also among one of the plants representing 35 major evolutionary plant lineages in the  Open Green … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  …
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Fungus Fuels Tree Growth
… and without an inoculation of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science Program in …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … mutualists.  Nature Genet. 47(4):410-415. Grigoriev et al (2014) MycoCosm portal: gearing up for 1000 fungal genomes.  …
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Ian Blaby
… biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool … a decade on. Trends in plant science . 19: 10, 672-680. 2014 Blaby, et. al., Systems-level analysis of nitrogen …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  …
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Tour the IGB
… pointing device to zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … carbon is stored in peatlands, which make up nearly 3 percent of the earth’s land surface. In the New … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of …
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Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol▿ †
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Jeremy Schmutz
Following the completion of the human genome project in 2003, he developed sequencing, assembly, and improvement … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … Nature Plants 3:17054. Schmutz, J, & McClean P et al. 2014. A reference genome for common bean and genome-wide …
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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … the effective management and strategic objectives for the JGI’s data science, informatics and information technology …
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