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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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Crysten Blaby-Haas
… with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … Molecular Foundry for genome-encoded biomaterial discovery, design, and engineering. … PhD, Microbiology and Cell … Google Scholar … Education … Awards and Service … Selected Publications …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground … Program (ECRP) award in 2021, which aims in part to build off of this work. Former JGI postdoctoral scholar …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground … Program (ECRP) award in 2021, which aims in part to build off of this work. Former JGI postdoctoral scholar …
Learn more
JGI@25: The Little Alga That Could
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … manual curation of the Chlamydomonas genes. The need for streamlining those gene names speaks to the impact of this …
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Natural Prodcast Episode 19: Bill Fenical
Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real … and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary metabolism … for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s contributions as reviewing …
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Cataloging the Microbes that Manage the Health of River Systems
United States. They also provided multiple access points to the information. The team harnessed a community-science program to collect samples from across the country to standardize … of water help regulate. However, the microbes also interact with compounds like fertilizers and microplastics that might …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough … plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems … Baldrian of the Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) Carefully … your proposal to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … the study elaborated on Nayfach’s comments. “This study was designed to encompass the broadest and most diverse range of … MAGs. Modeling A New Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria … a commonly-used process for studying microbial communities, with results published in the  November 2022 issue … as an even more complex and dynamic environment. By further streamlining the process for studying such microbial …
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