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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean … by HudsonAlpha scientists, with the help of funding from Mars Wrigley. The annotated genome has been updated to … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … road trips and hundreds of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for … In  Nature Communications , researchers describe a strategy to recover high value products from human waste. They   … produced by living organisms. The collaboration between the JGI and the Foundry on this project highlights an  ongoing …
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An Integrated Dataset to Understand Ecosystem Interaction
… poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how … processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as … through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of microbes living …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger … was really happening,” recalled Sean Gallaher, a research scientist in Sabeeha Merchant’s lab and first author of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy … and up to 500 nonpolar metabolomic analyses.   Q:  Can a Scientist from India can apply for support? A: Anyone from …
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A Complex Confection Decoded: Sugarcane Reference Genome
… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science … cultivar R570 has been  published in  Nature by an international consortium. With the genetic code of … to future environmental conditions. Additionally, insights from the genome could help scale sustainable sugarcane …
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Biodesign
… Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is … assembly and analysis Overview of biodesign products The JGI Biodesign platform enables users to validate hypotheses generated from mining genomic data by designing and assembling …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …
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Massie S. Ballon
… S. Ballon is the Communications and Outreach Manager at the JGI. Through multi-platform stories and outreach efforts, the team aims to broaden … science, including crafting technical reports, developing educational content, and writing feature profiles. She is one …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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A Natural Mechanism Can Turbocharge Viral Evolution
… how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … and industry applications. Summary In their recently published Nature Communications article , the team used … and viral genomes, as well as genomes sampled all at once from the same environment, called metagenomes. Why? Simon …
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