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Identifying the Microbial Cleanup Crew at a Superfund Site
… its way into the groundwater of several communities in New Mexico via leakage from a local dry-cleaner. … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI … the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  …
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Three Join the JGI User Executive Committee
… JGI User Executive Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve …
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50-year fire legacy regulates soil microbial carbon and nutrient cycling responses to new fire
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  … I need? A: Make a request through the NEON assignable assets program. Q: For a NEON Assignable Assets project, does … staying up to date via our website, social media, and newsletter. Q:  How would people find out about the NEON …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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JGI Workshops at PAG
… diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this … we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from … We will describe how to apply for a project with the JGI Community Science Program and how you can use the KBase …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… of the physical memorabilia that she’s held onto over the years. The DOE brought together the people and resources … to form the DOE Joint Genome Institute in 1997. Over the next seven years, and in collaboration with researchers at … of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 Schmutz, J., Martin, J., Terry, A. et …
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Quality MAGnified
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus … soil health. The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … work was performed on a project award ( https://doi.org/10.46936/cpcy.proj.2021.60161/60000437 ) under the FICUS …
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JGI@25: The Little Alga That Could
… JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been … specific algae. The reference genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched over a dozen of new Chlamydomonas genome-related Community Science Program …
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Four Researchers Join JGI User Executive Committee
… advanced genomic capabilities, large-scale AI-ready data and expertise to the global research community to study … contribute to the development of bio-based products and next-generation technologies, and toward a secure energy … are regular participants of the JGI annual user meeting and New Lineages of Life symposia. Bik is a recipient of the …
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Simon Roux
… tools to identify virus sequences, the design of new experimental approaches to link viruses to their … host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in … in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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