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… with little or no oxygen, life had found other ways to produce energy, using a process called fermentation. To better … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … more than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …

JGI innovates protocol revealing how genetic variations in … features and functions. Making connections between the structures and functions of the genes encoded in the genome … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first …

… and metabolic potential, with implications for energy production, environmental sustainability, and many other … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative …

… annotation, and analysis of three human chromosomes. After successful completion of the human genome project, Professor … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar …

The BioSANS instrument is at the Center for Structural Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted … (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, …

… the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for directed finishing and co-led the … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … kingdom. Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid …

JGI researchers lend expertise to develop tools and data hub … in developing and managing public viral genomics resources such as analytical tools and data repositories to two … metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic …

… nitrogen and carbon, as well as improving the tree’s production as a biofuel feedstock. Public accessibility to the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 89233218CNA000001 (LANL), and DE-AC05-76RL01830 (PNNL). … BioScales project on JGI Genomes Online Database … BioScales …

… and multicellularity enabled plants to develop complex structures and adapt to changing environments — ultimately … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … these algae are considered sisters to land plants, based on shared genetic traits and evolutionary lineage. They provide …

… and how the mutualistic associations allow host plants, such as candidate  bioenergy feedstock crops, to acquire … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & 1974). This …

In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about … State Fresno) and two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …