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A Plant Root Atlas for Tracking Developmental Trajectories
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially …
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Building Sphagnum Genomic Resources
… matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … as PI? A(nswer: The FICUS program is open to scientists at international institutes.  Applicants do not need to be US … Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  How can I get that NEON Biorepository Letter …
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A Sorghum Pangenome Opens More Doors to Discovery
… Plant Science Center.  This work is the result of an international collaboration, beginning with the work of the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to build this pangenome, including a reassembly of the BTx623 reference genome. This cultivar has been the reference …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … said Jonathan Benskin, who teaches the A-Level Advanced International Certificate of Education (AICE) Biology class …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said the …
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Defining a Pan-Genome for Antarctic Archaea
… the DOE Joint Genome Institute, a DOE Office of Science User Facility, microbial ecologist Rick Cavicchioli and his … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the … was supported by the EMBO Long-Term Fellowship ALTF 188–2014, which is co- funded by the European Commission …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental … (APS) at Argonne National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of … to the Facilities Integrating Collaborations for User Science (FICUS) Call Karolina Michalska , Advanced …
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Enlarging Windows into Understanding Gene Functions
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … as well as discover new functions. To help drive JGI User science we have implemented these two new methods as a …
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Work With the JGI! Tips for a Winning CSP Proposal
… this episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome Institute and the … Materials strategic initiative aims to enable the JGI user community to participate in the development and … to make, and it could be sold in the United States for $50-200, generating a potential profit of $1.4 million …
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DAS Tool for Genome Reconstruction from Metagenomes
… of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … with >90% completeness. These results, noted JGI User Programs Deputy Susannah Tringe , suggest that extracting …
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