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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus … primarily relied on culturing virus and host pairs in the laboratory to study their interactions. This work,  recently … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, used single-cell sequencing to …
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JGI@25: Studying Sorghum’s Survival Skills
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … crops as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, … Tolerance in Sorghum (EPICON) begins. Peggy Lemaux (UC Berkeley) and her team studied sorghum plants in drought …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… a DOE Office of Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global researchers on … by NIH Common Fund grant 1U24HL175772-01. This is not the first time Kyrpides and his colleagues have demonstrated how …
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Computationally Classifying Fungal Lifestyles
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has generated a more accurate phylogenetic …
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JGI at the AGU Fall Meeting
… research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About … Center, Poster Hall D-F poster B25J-1604: Eoin Brodie, Berkeley Lab: “Uncovering microbial metabolic trajectories … mountainous watersheds” December 15 12:51pm Joan Damerow, Berkeley Lab (short talk): “How do we make interdisciplinary …
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Laying the Foundation for a Genomic Rosetta Stone: Creating Information Hubs through the Use of Consensus Identifiers
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In … (JGI), a DOE Office of Science User Facility located at Berkeley Laboratory, built off past experience in developing … ( smc.jgi.doe.gov ) is designed with two main objectives. First and foremost, it is a BGC repository that aspires to …
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iPHoP: A Matchmaker for Phages and their Hosts
… helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they … new program called iPHoP (pronounced “eye-pop”,  freely available online ). It combines and evaluates multiple … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, aimed to streamline a process …
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JGI Scientists Pen Genome Watch Articles
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in environmental … the article comes out — about two months after the first draft. Woyke has so far selected the authors of these …
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JGI@25: Roots of a Mutualist Relationship
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a mycorrhizal fungus shifted the …
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10 From JGI on the 2019 Highly Cited Researchers List
… and Asaf Salamov were part of a team that presented the first large analysis of an Aspergillus fungal subgroup, … that produces cacao beans. The improved cacao genome is available on the latest version of the JGI plant portal …
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