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As SIP experiments shed more light on microbial communities than ever before — especially with … work to create FAIR datasets to maximize returns on these advances. Over the last two decades, Stable Isotope … comparable data with useful and accessible metadata multiplies these possibilities, and maximizes returns from the …

… prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of Energy (DOE) … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … My name is Dan Udwary. I – as well as my co-host, Alison Takemura, whose voice you’ll hear in a minute – we work … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …

In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Congratulations to Jennifer Doudna of …

The  National Ecological Observatory Network (NEON) is a network of field research sites designed to collect … assignable assets program. Q: For a NEON Assignable Assets project, does the data produced become public as well? A:  …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications The planet’s microbial diversity is … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the …

… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency declared the North Railroad … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …

On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …

When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High … biology, Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor them. …

A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … from the warm, well-lit surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …

… a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … at microbial genomes across a spectrum of burned soils. By connecting microbial genes with functions useful for forest … DOE Office of Science National User Facilities in a single project. … This work was supported through a USDA NIFA award …

Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might …