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Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family Discinaceae (Pezizales, Ascomycota)
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Emiley Eloe-Fadrosh
… 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics … Microbiome Data Collaborative (NMDC). Prospective users with questions on how to partner with the Metagenome Science …
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Leveraging single-cell genomics to expand the fungal tree of life
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Exploring and expanding the natural chemical space of bacterial diterpenes
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, viruses outnumber the microbes by at least another order of … at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide … and recaps of all three keynote talks follow, starting with Bruce Hungate. Other videos of talks from the JGI … research (see his  2021 VEGA talk ). A global authority on viruses, Holmes was part of  the initial release the genome …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … 2 of our “primer” episode, so if you ended up here somehow without having listened to the first part, you might be a … Episode Transcript … on  Apple ,  Google ,  Spotify ,  Stitcher , directly with the  RSS link , and via most other commonly-used …
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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A User-Centered Approach to Accessing JGI Data
… launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for … Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Time‐series metatranscriptomes reveal conserved patterns between phototrophic and heterotrophic microbes in diverse freshwater systems
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