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Virus Discoveries that Keep Getting Bigger
… Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … culture-independent approaches to gain insight into the  genomes of giant viruses. In a new review, researchers from … viruses or single host cells harboring them — could be a future option to discovering giant viruses. Further, …
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JGI announces 2023 CSP Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …
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The Mobilome in the Mire
… have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move … up new options for engineering these microbes in the future. Join Sarah Bagby (Case Western Reserve University) …
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JGI announces 2025 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows …
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Fishing for Novel Cellulose Degraders
… by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to sort cells into several small pools, followed by whole genome amplification and shotgun sequencing. The team first … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … variation in haloarchaea, they also characterized metagenomes (collections of partial genomes) from six … haloarchaea across East Antarctica. The implications of the current study are important both to understanding genomic …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… . The VFP is a summer professional development program for current faculty. Applying faculty members may invite up to … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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JGI announces final round of 2022 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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Creating an Energy Market for Miscanthus
… addition to your garden and a potential fuel for the future. But, to be competitive in the market, both energy …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. … Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Trent Northen
… Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … Wang G et al. Chassis-Independent Recombinase-Assisted Genome Engineering Enables Rapid Activation of Biosynthetic …
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