Results

IMG/M: a data management and analysis system for metagenomes
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A synthesis of bacterial and archaeal phenotypic trait data
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Biases in genome reconstruction from metagenomic data
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Visualizing metagenomic and metatranscriptomic data: A comprehensive review
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Toward a Data Infrastructure for the Plant Cell Atlas.
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AmiGO: online access to ontology and annotation data
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Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
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Jeremy Schmutz
Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … Bennetzen, JL & Schmutz, J et al. 2012. Reference genome sequence of the model plant Setaria. Nature Biotechnology …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  …
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