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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … DOE Office of Biological and Environmental Research (BER) program. In service of solutions that will impact society, …
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New and Improved: Eucalyptus Reference is Now Accessible
… The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … researchers including first author Anneri Lötter, a graduate student in Zander Myburg's lab, aimed to provide an … with GENESPACE, a computational tool for comparative genomics.   With a more robust reference genome, researchers …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … generation of STEM professionals. Students can apply for internships and work onsite with an experienced researcher … Berkeley. Sally Liao came in through the DOE  Science Undergraduate Laboratory Internship program, while Oliver Benelli …
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Synthetic Biology Informatics Group
… develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… around the planet–through techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the … Adjunct Professor at the University of California, Merced. Woyke received a 2014 Berkeley Lab Director’s Award …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of … unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of … P23117-B17, P25111-B22, P26392-B20, and I1628-B22), the JGI (CSP 605), the German Research Foundation (DFG, PE …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the … double-stranded DNA. Co-first author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine sequencing, DNA …
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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