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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., presence of “intact” … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How …
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JGI announces second round of 2023 New Investigator awardees
… [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin Hammer, Christina Hazard, Rachel Mackelprang, Brook Moyers, Mei, Ran,; … Tlaskal, Fernando Torralbo, Luis Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… fellow at the Biological and Environmental Sciences and Engineering Division at King Abdullah University of Science and Technology (KAUST) in …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… As part of the ongoing partnership between DOE JGI and UC Merced to promote … spoke briefly about their internship experiences at the DOE JGI – revisit their videos at …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory … webinar complements a  recent webinar co-hosted by the JGI and EMSL inviting researchers to apply for a FICUS …
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Whole Community Metatranscriptomes and Lipidomes Reveal Diverse Responses Among Antarctic Phytoplankton to Changing Ice Conditions
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing …
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Massie S. Ballon
… S. Ballon is the Communications and Outreach Manager at the JGI. Through multi-platform stories and outreach efforts, … and collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping … over a decade. Her portfolio spans a wide range of topics beyond translating science, including crafting technical …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was … eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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