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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our … tools beyond biomass breakdown, extending into biochemical production.    Over time, as these projects have delivered … pave the way for many different kinds of plant-derived production.  “Sculpting those communities is really a hard …
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a … materials, which could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… of UC Santa Barbara discuss the importance of studying anaerobic fungi, as well as a recent discovery that … and opens up a new avenue to explore for efficient biofuel production. …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane … each piece of understanding paves the way for optimizing production of chemicals and plastics with this system. “From … bacterial sulfur metabolism and leveraging it for biofuel production. After seeing that sulfur metabolism could …
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, sample/capacity limits, … The CSP and FICUS calls are open to both domestic and international applicants from any institution type and at …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support … Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the …
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Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in … pipelines to transition bench-scale methods into production workflows. He developed and scaled the … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, University of California, San Diego …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … to living on a changing planet. In this short audio production, we’ll hear from Ed Hall, an ecologist at … are introduced, how do they adapt by changing what macromolecules are in their biomass, because that affects the …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI … who offer perspectives on what the next five years of innovation could look like. In one article, Micro-Scale … cell sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar … copies of chromosomes. Sugarcane accounts for 80% of sugar production worldwide, but has one of the most complex …
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