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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative … Science  356: 82-85 Ovchinnikov S. et al. (2017) Protein structure determination using metagenome sequence …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes … these cells so that their DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, … Lead Tanja Woyke , Microbial Program Gitta Szabo , User Project Coordination Rekha Seshadri, Functional Annotation …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work … C., Meyer, C., Højlund, K., Yi, Z., & others (2010). Proteomics analysis of human skeletal muscle reveals novel …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … whose biomass can be renewably converted into energy or biofuels. Although a member of the grass family, as its name …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … large and giant. In a recent study  published in the journal  Nature , a team led by researchers at the U.S. … to mine, bin and then filter the data for the major capsid protein (MCP) to identify NCLDV viruses. JGI researchers …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … Ingelheim Fellow. Reviewer for major funding agencies and journals including National Institutes of Health, American … 89-93. Hess M, Sczyrba A, Egan R, Kim TW, Chokhawala H, Schroth G, Luo S, Clark DS, Chen F, Zhang T, Mackie RI, …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and … (AMF), known to provide plants with nutrients and pathogen protection. Specifically, gene expression in that set, …
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A Community Resource for Secondary Metabolite Researchers
Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most … (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , the Secondary Metabolism …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … whose biomass can be renewably converted into energy or biofuels. Although a member of the grass family, as its name …
Learn more
Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The … just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the overwhelming majority of … associated greenhouse gas emissions as well as the need to protect these vital ecosystems. Peat bogs have two distinct …
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