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JGI Workshop at 2025 Aquatic Sciences Meeting
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of … zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules
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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory … program. Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  How can I get that NEON … us as soon as possible. Q:  What if the NEON Biorepository doesn’t have enough samples or the type of samples that I …
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A Complex Confection Decoded: Sugarcane Reference Genome
… The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … protect other crops facing similar pathogens. Summary Many plants, sugarcane included, are polyploid and have multiple … Development (CIRAD), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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A Step Toward Controlling Soybean Rust
… reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Metagenome Program
… along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom interfaces and … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …
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How Maize Makes An Antibiotic Cocktail
… of chemicals called terpenes. Terpenes are important in plant growth, defense, and environmental interactions, and … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … genes were synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served … pipeline and, in collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an … compact genome, diploid nature, self compatibility, rapid generation time and simple growth requirements. Links to …
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Microbiome Data Science Team
… include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological applications (e.g., … Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat Biotechnol . Epub. Neri …
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