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… The Science In a recent Microbiome paper , scientists focused on the conifer needle microbiome. The phyllosphere, … pine, Douglas fir and Engelmann spruce–to learn more about conifer needle microbiomes. The survey showed what … genetic elements across all of the metagenomes. Learn more about her time at the JGI here . Bennett is applying the …

… DOE user facilities EMSL and JGI announce FY 2020 collaborative … conducted through the  Belowground Biogeochemistry Scientific Focus Area (SFA), supported by the Terrestrial … the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming …

… well as the evolution of seed plants, the fern’s distant cousin. Ceratopteris richardii, or C-fern, specifically has … of plant-based biofuels and bioproducts. ( Learn more about OGG in  this episode of to the JGI podcast Genome … for 85.2% of the C-fern assembly. While they did identify a couple WGD events, these events could not fully …

… walls, while brown rot cannot break down the lignin but use cellulose. Finally, there are soil saprotrophs, which degrade plant detritus. Despite the different modes of nutrition, many of these … in moving toward functional genomics studies to learn more about the inner workings of plant-host and …

… a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … an endophyte, living between a plant’s root cells. The fungus is almost always found among and within poplar trees, and … were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . …

… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have … approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently published in the  …

… Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … to teach a second year A-Level Advanced International Certificate of Education (AICE) Biology class at Florida’s Boca …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… deciphering the complex wiring behind a city’s power grid. Just as the flow of electricity controls when and where … from grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said Leo Baumgart, … Advancing gene regulation mapping Previous methods to identify where transcription factors (TFs) — the proteins that …

… so nice and helpful.”     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to talking about their work. It’s fun to be around people who are generous with their time and like nerding out about the big stuff, well, the little stuff! People hold …

… a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome Institute and the … can synthesize other bio-based materials. For information about licensing the patented osteoyeast for hydroxyapatite …

… carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree … give researchers a way to access much more information about fungi in these environments. “Now with these new tools … soil samples of these varied biomes; the forests share only about 20% of their fungal species. To make useful …